The Environmental Microbiome in a Changing World

The Environmental Microbiome in a Changing World
Author: Stephanie M. Juice
Publisher:
Total Pages: 324
Release: 2020
Genre: Soil microbiology
ISBN:

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Climate change can alter ecosystem processes and organismal phenology through both long-term, gradual changes and alteration of disturbance regimes. Because microbes mediate decomposition, and therefore the initial stages of nutrient cycling, soil biogeochemical responses to climate change will be driven by microbial responses to changes in temperature, precipitation, and pulsed climatic events. Improving projections of soil ecological and biogeochemical responses to climate change effects therefore requires greater knowledge of microbial contributions to decomposition. This dissertation examines soil microbial and biogeochemical responses to the long-term and punctuated effects of climate change, as well as improvement to decomposition models following addition of microbial parameters. First, through a climate change mesocosm experiment on two soils, I determined that biogeochemical losses due to warming and snow reduction vary across soil types. Additionally, the length of time with soil microbial activity during plant dormancy increased under warming, and in some cases decreased following snow reduction. Asynchrony length was positively related to carbon and nitrogen loss. Next, I examined soil enzyme activity, carbon and nitrogen biodegradability, and fungal abundance in response to ice storms, an extreme event projected to occur more frequently under climate change in the northeastern United States. Enzyme activity response to ice storm treatments varied by both target nutrient and, for nitrogen, soil horizon. Soil horizons often experienced opposite response of enzyme activity to ice storm treatments, and increasing ice storm frequency also altered the direction of the microbial response. Mid-levels of ice storm treatment additionally increased fungal hyphal abundance. Finally, I added explicit microbial parameters to a global decomposition model that previously incorporated climate and litter quality. The best mass loss model simply added microbial flows between litter quality pools, and addition of a microbial biomass and products pool also improved model performance compared to the traditional implicit microbial model. Collectively, these results illustrate the importance of soil characteristics to the biogeochemical and microbial response to both gradual climate change effects and extreme events. Furthermore, they show that large-scale decomposition models can be improved by adding microbial parameters. This information is relevant to the effects of climate change and microbial activity on biogeochemical cycles.

Microbiome Under Changing Climate

Microbiome Under Changing Climate
Author: Ajay Kumar
Publisher: Woodhead Publishing
Total Pages: 575
Release: 2022-01-21
Genre: Technology & Engineering
ISBN: 0323906974

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Microbiome Under Changing Climate: Implications and Solutions presents the latest biotechnological interventions for the judicious use of microbes to ensure optimal agricultural yield. Summarizing aspects of vulnerability, adaptation and amelioration of climate impact, this book provides an important resource for understanding microbes, plants and soil in pursuit of sustainable agriculture and improved food security. It emphasizes the interaction between climate and soil microbes and their potential role in promoting advanced sustainable agricultural solutions, focusing on current research designed to use beneficial microbes such as plant growth promoting microorganisms, fungi, endophytic microbes, and more. Changes in climatic conditions influence all factors of the agricultural ecosystem, including adversely impacting yield both in terms of quantity and nutritional quality. In order to develop resilience against climatic changes, it is increasingly important to understand the effect on the native micro-flora, including the distribution of methanogens and methanotrophs, nutrient content and microbial biomass, among others. Demonstrates the impact of climate change on secondary metabolites of plants and potential responses Incorporates insights on microflora of inhabitant soil Explores mitigation processes and their modulation by sustainable methods Highlights the role of microbial technologies in agricultural sustainability

Microbiomes and the Global Climate Change

Microbiomes and the Global Climate Change
Author: Showkat Ahmad Lone
Publisher: Springer Nature
Total Pages: 374
Release: 2021-07-02
Genre: Science
ISBN: 981334508X

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This book covers the contemporary environmental issues faced by life on the planet and the role planetary microbiomes play in such issues. Providing insights on the net favorable and adverse effect of microbial processes, this volume covers both the spontaneous and anthropocentric events that impact climate change and life on the planet. The book describes the ecological significance of microbiomes associated with the kingdoms Plantae and Animalia with respect to climate change, natural and anthropogenic causes of climate change, microbial interactions in nature, planetary microbiomes and food security, climate change in relation to disease epidemiology and human health and engineering microorganisms to mitigate the consequences of climate change. The individual chapters in the intended book provide both theoretical and practical exposure to the current issues and future challenges of climate change in relation to the microbiomes. This collection should serve as ready reference to the researchers working in the area to reshape their future research in addressing the challenges of global climate change.

Microbiomes of the Built Environment

Microbiomes of the Built Environment
Author: National Academies of Sciences, Engineering, and Medicine
Publisher: National Academies Press
Total Pages: 318
Release: 2017-10-06
Genre: Science
ISBN: 0309449839

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People's desire to understand the environments in which they live is a natural one. People spend most of their time in spaces and structures designed, built, and managed by humans, and it is estimated that people in developed countries now spend 90 percent of their lives indoors. As people move from homes to workplaces, traveling in cars and on transit systems, microorganisms are continually with and around them. The human-associated microbes that are shed, along with the human behaviors that affect their transport and removal, make significant contributions to the diversity of the indoor microbiome. The characteristics of "healthy" indoor environments cannot yet be defined, nor do microbial, clinical, and building researchers yet understand how to modify features of indoor environmentsâ€"such as building ventilation systems and the chemistry of building materialsâ€"in ways that would have predictable impacts on microbial communities to promote health and prevent disease. The factors that affect the environments within buildings, the ways in which building characteristics influence the composition and function of indoor microbial communities, and the ways in which these microbial communities relate to human health and well-being are extraordinarily complex and can be explored only as a dynamic, interconnected ecosystem by engaging the fields of microbial biology and ecology, chemistry, building science, and human physiology. This report reviews what is known about the intersection of these disciplines, and how new tools may facilitate advances in understanding the ecosystem of built environments, indoor microbiomes, and effects on human health and well-being. It offers a research agenda to generate the information needed so that stakeholders with an interest in understanding the impacts of built environments will be able to make more informed decisions.

Microbial Life in the Cryosphere and Its Feedback on Global Change

Microbial Life in the Cryosphere and Its Feedback on Global Change
Author: Susanne Liebner
Publisher: Walter de Gruyter GmbH & Co KG
Total Pages: 285
Release: 2021-01-18
Genre: Science
ISBN: 3110497085

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The cryosphere stands for environments where water appears in a frozen form. It includes permafrost, glaciers, ice sheets, and sea ice and is currently more affected by Global Change than most other regions of the Earth. In the cryosphere, limited water availability and subzero temperatures cause extreme conditions for all kind of life which microorganisms can cope with extremely well. The cryosphere’s microbiota displays an unexpectedly large genetic potential, and taxonomic as well as functional diversity which, however, we still only begin to map. Also, microbial communities influence reaction patterns of the cryosphere towards Global Change. Altered patterns of seasonal temperature fluctuations and precipitation are expected in the Arctic and will affect the microbial turnover of soil organic matter (SOM). Activation of nutrients by thawing and increased active layer thickness as well as erosion renders nutrient stocks accessible to microbial activities. Also, glacier melt and retreat stimulate microbial life in turn influencing albedo and surface temperatures. In this context, the functional resilience of microbial communities in the cryosphere is of major interest. Particularly important is the ability of microorganisms and microbial communities to respond to changes in their surroundings by intracellular regulation and population shifts within functional niches, respectively. Research on microbial life exposed to permanent freeze or seasonal freeze-thaw cycles has led to astonishing findings about microbial versatility, adaptation, and diversity. Microorganisms thrive in cold habitats and new sequencing techniques have produced large amounts of genomic, metagenomic, and metatranscriptomic data that allow insights into the fascinating microbial ecology and physiology at low and subzero temperatures. Moreover, some of the frozen ecosystems such as permafrost constitute major global carbon and nitrogen storages, but can also act as sources of the greenhouse gases methane and nitrous oxide. In this book we summarize state of the art knowledge on whether environmental changes are met by a flexible microbial community retaining its function, or if the altered conditions also render the community in a state of altered properties that affect the Earth’s element cycles and climate. This book brings together research on the cryosphere’s microbiota including permafrost, glaciers, and sea ice in Arctic and Antarctic regions. Different spatial scales and levels of complexity are considered, spanning from ecosystem level to pure culture studies of model microbes in the laboratory. It aims to attract a wide range of parties with interest in the effect of climate change and/or low temperatures on microbial nutrient cycling and physiology.

Climate Change and the Microbiome

Climate Change and the Microbiome
Author: D. K. Choudhary
Publisher: Springer Nature
Total Pages: 737
Release: 2021-10-13
Genre: Science
ISBN: 3030768635

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This book highlights the impact of climate change on the soil microbiome and its subsequent effects on plant health, soil-plant dynamics, and the ecosphere. It also discusses emerging ideas to counteract these effects, e.g., through agricultural applications of functional microbes, to ensure a sustainable ecosystem. Climate change is altering the soil microbiome distributions and thus the interactions in microbiome and plant‐soil microorganism. Improvement of our understanding of microbe-microbe and plant-microbe interaction under changing climatic conditions is essential, because the overall impact of these interactions under varying adverse environmental conditions is lacking. This book has been designed to understand the impact of climate change, i.e., mainly salt and drought stress, on the soil microbiome and its impact on plant, yield, and the ecosphere. The book is organized into four parts: The first part reviews the impact of climate change on the diversity and richness of the soil microbiome. The second part addresses effects of climate change on plant health. The third part discusses effects on soil-plant dynamics and functionality, e.g., soil productivity. The final part deals with the effects of climate change on ecosystem functioning and also discusses potential solutions. The book will appeal to students and researchers working in the area of soil science, agriculture, molecular biology, plant physiology, and biotechnology.

Climate Change and Microbes

Climate Change and Microbes
Author: Javid A. Parray
Publisher: CRC Press
Total Pages: 328
Release: 2022-05-18
Genre: Nature
ISBN: 100041003X

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This book provides an enlightening picture of the role of microbes for sustaining life systems and how climatic factors will change the course of the processes. Climate Change and Microbes: Impacts and Vulnerability explores the little-addressed issue of the effects of climate change on microbial ecosystems and the influence of climate change on microbiome diversity across various habitats and regions. Recent years have seen the evidence that microbial communities are neither immune to disruption nor do they have the capacity to recover completely after a stressful climate event. This volume documents the important role of microorganisms as climate engineers and considers mitigation and adaptation strategies as well. It goes on to present the research that addresses a diverse array of topics on the impact of climate change on plant-microbe interactions and microbial aquatic life and change-induced aggravations in microbial populations and processes. The book also addresses microbial foodborne diseases resulting from challenging climates. Other topics include algae as indicators of climate change and strategies for facilitating sustainable agro-ecosystems. This book will be immensely helpful in the study of plant microbiology, agricultural sciences, biotechnology, climate science, and environmental microbiology. It will also be applicable to the field of microbial biotechnology, agricultural, and other life and environmental sciences.

Microbiome Community Ecology

Microbiome Community Ecology
Author: Muhammad Saleem
Publisher: Springer
Total Pages: 157
Release: 2015-01-20
Genre: Science
ISBN: 3319116657

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This book reviews the mechanisms, patterns, and processes that regulate prokaryotic diversity through different habitats in the context of evolutionary and ecological hypotheses, principles, and theories. Despite the tremendous role of prokaryotic diversity in the function of the global ecosystem, it remains understudied in comparison to the rest of biological diversity. In this book, the authors argue that understanding the mechanisms of species coexistence, functioning relationships (e.g. nutrient cycling and host fitness), and trophic and non-trophic interactions are helpful in addressing the future challenges in basic and applied research in microbial ecology. The authors also examine the ecological and evolutionary responses of prokaryotes to global change and biodiversity loss. Ecological Diversity of the Microbiome in the Context of Ecology Theory and Climate Change aims to bring prokaryotes into the focus of ecological and evolutionary research, especially in the context of global change.

The Human Microbiome, Diet, and Health

The Human Microbiome, Diet, and Health
Author: Food Forum
Publisher: National Academies Press
Total Pages: 197
Release: 2013-02-27
Genre: Medical
ISBN: 030926586X

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The Food Forum convened a public workshop on February 22-23, 2012, to explore current and emerging knowledge of the human microbiome, its role in human health, its interaction with the diet, and the translation of new research findings into tools and products that improve the nutritional quality of the food supply. The Human Microbiome, Diet, and Health: Workshop Summary summarizes the presentations and discussions that took place during the workshop. Over the two day workshop, several themes covered included: The microbiome is integral to human physiology, health, and disease. The microbiome is arguably the most intimate connection that humans have with their external environment, mostly through diet. Given the emerging nature of research on the microbiome, some important methodology issues might still have to be resolved with respect to undersampling and a lack of causal and mechanistic studies. Dietary interventions intended to have an impact on host biology via their impact on the microbiome are being developed, and the market for these products is seeing tremendous success. However, the current regulatory framework poses challenges to industry interest and investment.

Understanding the Microbiome Interactions in Agriculture and the Environment

Understanding the Microbiome Interactions in Agriculture and the Environment
Author: Pallaval Veera Bramhachari
Publisher: Springer Nature
Total Pages: 355
Release: 2022-07-25
Genre: Science
ISBN: 981193696X

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This book illustrates the importance of microbiome interactions in sustainable agriculture and the environment. The chapters of the book provide information pertaining to the vast diversity of microbiomes in many ecosystems and their functional dynamics. The book also discusses bioremediation, space microbiomes, geo microbiomes, coral microbiomes, antibiotic resistomes, and rhizomicrobiome. It also sheds light on the complex syntrophic and other symbiotic interactions between bacteria, protists, plants, and certain animals in agricultural and environmental systems. The book, in turn, provides an understanding of the adaptation, resilience, and evolution of microbial ecosystems. Further, the chapters cover metagenomics analysis of microbiomes of a novel or extreme environments, microbial resilience or temporal fluctuations, symbiosis and co-evolution of the microbiome, and novel microbial interactions in agriculture and environment. Finally, the book elucidates a comprehensive yet representative description of complex structural and functional diversity within the plant and environmental microbiomes to reveal their immense potential. This book covers United Nations Sustainable Developmental Goal 2 towards Zero Hunger.