Spatial Regulation of Gene Expression in Neurons During Synapse Formation and Synaptic Plasticity

Spatial Regulation of Gene Expression in Neurons During Synapse Formation and Synaptic Plasticity
Author: Sangmok Kim
Publisher:
Total Pages: 167
Release: 2013
Genre:
ISBN:

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MRNA localization and regulated translation allow individual neurons to locally regulate the proteome of each of their many subcellular compartments. To investigate the spatial regulation of gene expression during synaptic plasticity, we used a translational reporter system to demonstrate synapse- and stimulus-specific translation during long-term facilitation of Aplysia sensory-motor synapse. These studies revealed a role for a retrograde signal from the postsynaptic motor neuron in regulating translation in the presynaptic sensory neuron. Additional studies with the translational reporter demonstrated that distinct cis-acting localization elements were involved in targeting mRNA to distal neurites and to synapses. Our studies identified a 66 nucleotide long stem loop structure that directs mRNAs to synapses. In the final part of my thesis research, I addressed the question of whether and how synaptogenic signals direct mRNA targeting and spatially regulate gene expression during synapse formation. I cultured a bifurcated Aplysia sensory neuron contacting a nontarget motor neuron, with which it did not form chemical synapses, and a target motor neuron, with which it formed glutamatergic synapses, and imaged RNA and protein localization. I find that RNAs and translational machinery are delivered throughout the neuron, but that translation is enriched at sites of synaptic contact. Investigation of the molecular mechanisms that promote local translation revealed a role for netrin1-DCC signaling. Together, my research indicates that the spatial regulation of gene expression during synapse formation and during synaptic plasticity is mediated at the level of translation. This mechanism maximizes neuronal plasticity by rendering each compartment capable of locally changing its proteome in response to local cues.

The Evolution of Sex Determination

The Evolution of Sex Determination
Author: Leo Beukeboom
Publisher: OUP Oxford
Total Pages: 455
Release: 2014-06-12
Genre: Science
ISBN: 019163140X

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Sexual reproduction is a fundamental aspect of life. It is defined by the occurrence of meiosis and the fusion of two gametes of different sexes or mating types. Sex-determination mechanisms are responsible for the sexual fate and development of sexual characteristics in an organism, be it a unicellular alga, a plant, or an animal. In many cases, sex determination is genetic: males and females have different alleles or different genes that specify their sexual morphology. In animals, this is often accompanied by chromosomal differences. In other cases, sex may be determined by environmental (e.g. temperature) or social variables (e.g. the size of an organism relative to other members of its population). Surprisingly, sex-determination mechanisms are not evolutionarily conserved but are bewilderingly diverse and appear to have had rapid turnover rates during evolution. Evolutionary biologists continue to seek a solution to this conundrum. What drives the surprising dynamics of such a fundamental process that always leads to the same outcome: two sex types, male and female? The answer is complex but the ongoing genomic revolution has already greatly increased our knowledge of sex-determination systems and sex chromosomes in recent years. This novel book presents and synthesizes our current understanding, and clearly shows that sex-determination evolution will remain a dynamic field of future research. The Evolution of Sex Determination is an advanced, research level text suitable for graduate students and researchers in genetics, developmental biology, and evolution.

Fitting Models to Biological Data Using Linear and Nonlinear Regression

Fitting Models to Biological Data Using Linear and Nonlinear Regression
Author: Harvey Motulsky
Publisher: Oxford University Press
Total Pages: 352
Release: 2004-05-27
Genre: Mathematics
ISBN: 9780198038344

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Most biologists use nonlinear regression more than any other statistical technique, but there are very few places to learn about curve-fitting. This book, by the author of the very successful Intuitive Biostatistics, addresses this relatively focused need of an extraordinarily broad range of scientists.

Dynamic Biological Networks

Dynamic Biological Networks
Author: Ronald M. Harris-Warrick
Publisher: MIT Press
Total Pages: 366
Release: 1992
Genre: Crustacea
ISBN: 9780262082143

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This introduction to the crustacean stomatogastric nervous system (STNS) describes some of the best-understood neural networks in the animal kingdom at cellular, network, behavioural, comparative and evolutionary levels of analysis.

Model Animals in Neuroendocrinology

Model Animals in Neuroendocrinology
Author: Mike Ludwig
Publisher: John Wiley & Sons
Total Pages: 460
Release: 2018-11-05
Genre: Medical
ISBN: 111939094X

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Model Animals in Neuroendocrinology: From Worm to Mouse to Man offers a masterclass on the opportunities that different model animals offer to the basic understanding of neuroendocrine functions and mechanisms of action and the implications of this understanding. The authors review recent advances in the field emanating from studies involving a variety of animal models, molecular genetics, imaging technologies, and behavior assays. These studies helped unravel mechanisms underlying the development and function of neuroendocrine systems. The book highlights how studies in a variety of model animals, including, invertebrates, fish, birds, rodents and mammals has contributed to our understanding of neuroendocrinology. Model Animals in Neuroendocrinology provides students, scientists and practitioners with a contemporary account of what can be learnt about the functions of neuroendocrine systems from studies across animal taxonomy. This is the seventh volume in the Masterclass in Neuroendocrinology Series, a co-publication between Wiley and the INF (International Neuroendocrine Federation) that aims to illustrate highest standards and encourage the use of the latest technologies in basic and clinical research and hopes to provide inspiration for further exploration into the exciting field of neuroendocrinology.

The Neurobiology of Olfaction

The Neurobiology of Olfaction
Author: Anna Menini
Publisher: CRC Press
Total Pages: 438
Release: 2009-11-24
Genre: Science
ISBN: 1420071998

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Comprehensive Overview of Advances in OlfactionThe common belief is that human smell perception is much reduced compared with other mammals, so that whatever abilities are uncovered and investigated in animal research would have little significance for humans. However, new evidence from a variety of sources indicates this traditional view is likely

Micro-, Meso- and Macro-Connectomics of the Brain

Micro-, Meso- and Macro-Connectomics of the Brain
Author: Henry Kennedy
Publisher: Springer
Total Pages: 173
Release: 2016-03-10
Genre: Medical
ISBN: 3319277774

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This book has brought together leading investigators who work in the new arena of brain connectomics. This includes ‘macro-connectome’ efforts to comprehensively chart long-distance pathways and functional networks; ‘micro-connectome’ efforts to identify every neuron, axon, dendrite, synapse, and glial process within restricted brain regions; and ‘meso-connectome’ efforts to systematically map both local and long-distance connections using anatomical tracers. This book highlights cutting-edge methods that can accelerate progress in elucidating static ‘hard-wired’ circuits of the brain as well as dynamic interactions that are vital for brain function. The power of connectomic approaches in characterizing abnormal circuits in the many brain disorders that afflict humankind is considered. Experts in computational neuroscience and network theory provide perspectives needed for synthesizing across different scales in space and time. Altogether, this book provides an integrated view of the challenges and opportunities in deciphering brain circuits in health and disease.

The Oxford Handbook of Invertebrate Neurobiology

The Oxford Handbook of Invertebrate Neurobiology
Author: John H. Byrne
Publisher: Oxford University Press
Total Pages: 608
Release: 2019-01-29
Genre: Science
ISBN: 0190456787

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Invertebrates have proven to be extremely useful model systems for gaining insights into the neural and molecular mechanisms of sensory processing, motor control and higher functions such as feeding behavior, learning and memory, navigation, and social behavior. A major factor in their enormous contributions to neuroscience is the relative simplicity of invertebrate nervous systems. In addition, some invertebrates, primarily the molluscs, have large cells, which allow analyses to take place at the level of individually identified neurons. Individual neurons can be surgically removed and assayed for expression of membrane channels, levels of second messengers, protein phosphorylation, and RNA and protein synthesis. Moreover, peptides and nucleotides can be injected into individual neurons. Other invertebrate model systems such as Drosophila and Caenorhabditis elegans offer tremendous advantages for obtaining insights into the neuronal bases of behavior through the application of genetic approaches. The Oxford Handbook of Invertebrate Neurobiology reviews the many neurobiological principles that have emerged from invertebrate analyses, such as motor pattern generation, mechanisms of synaptic transmission, and learning and memory. It also covers general features of the neurobiology of invertebrate circadian rhythms, development, and regeneration and reproduction. Some neurobiological phenomena are species-specific and diverse, especially in the domain of the neuronal control of locomotion and camouflage. Thus, separate chapters are provided on the control of swimming in annelids, crustaea and molluscs, locomotion in hexapods, and camouflage in cephalopods. Unique features of the handbook include chapters that review social behavior and intentionality in invertebrates. A chapter is devoted to summarizing past contributions of invertebrates to the understanding of nervous systems and identifying areas for future studies that will continue to advance that understanding.

Behavioral Genetics of the Fly (Drosophila Melanogaster)

Behavioral Genetics of the Fly (Drosophila Melanogaster)
Author: Josh Dubnau
Publisher: Cambridge University Press
Total Pages: 309
Release: 2014-06-26
Genre: Medical
ISBN: 1107009030

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A comprehensive portrayal of the behaviour genetics of the fruit fly (Drosophila melanogaster) and the methods used in these studies.