Optimizing HPC Applications with Intel Cluster Tools

Optimizing HPC Applications with Intel Cluster Tools
Author: Alexander Supalov
Publisher: Apress
Total Pages: 291
Release: 2014-10-09
Genre: Computers
ISBN: 1430264977

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Optimizing HPC Applications with Intel® Cluster Tools takes the reader on a tour of the fast-growing area of high performance computing and the optimization of hybrid programs. These programs typically combine distributed memory and shared memory programming models and use the Message Passing Interface (MPI) and OpenMP for multi-threading to achieve the ultimate goal of high performance at low power consumption on enterprise-class workstations and compute clusters. The book focuses on optimization for clusters consisting of the Intel® Xeon processor, but the optimization methodologies also apply to the Intel® Xeon Phi™ coprocessor and heterogeneous clusters mixing both architectures. Besides the tutorial and reference content, the authors address and refute many myths and misconceptions surrounding the topic. The text is augmented and enriched by descriptions of real-life situations.

Supercomputing

Supercomputing
Author: Vladimir Voevodin
Publisher: Springer
Total Pages: 382
Release: 2017-03-09
Genre: Computers
ISBN: 331955669X

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This book constitutes the refereed proceedings of the Second Russian Supercomputing Days, RuSCDays 2016, held in Moscow, Russia, in September 2016. The 28 revised full papers presented were carefully reviewed and selected from 94 submissions. The papers are organized in topical sections on the present of supercomputing: large tasks solving experience; the future of supercomputing: new technologies.

Parallel Processing and Applied Mathematics

Parallel Processing and Applied Mathematics
Author: Roman Wyrzykowski
Publisher: Springer
Total Pages: 501
Release: 2018-03-22
Genre: Computers
ISBN: 3319780549

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The two-volume set LNCS 10777 and 10778 constitutes revised selected papers from the 12th International Conference on Parallel Processing and Applied Mathematics, PPAM 2017, held in Lublin, Poland, in September 2017. The 49 regular papers presented in the proceedings were selected from 98 submissions. For the workshops and special sessions, that were held as integral parts of the PPAM 2017 conference, a total of 51 papers was accepted from 75 submissions. The papers were organized in topical sections named as follows: Part I: numerical algorithms and parallel scientific computing; particle methods in simulations; task-based paradigm of parallel computing; GPU computing; parallel non-numerical algorithms; performance evaluation of parallel algorithms and applications; environments and frameworks for parallel/distributed/cloud computing; applications of parallel computing; soft computing with applications; and special session on parallel matrix factorizations. Part II: workshop on models, algorithms and methodologies for hybrid parallelism in new HPC systems; workshop power and energy aspects of computations (PEAC 2017); workshop on scheduling for parallel computing (SPC 2017); workshop on language-based parallel programming models (WLPP 2017); workshop on PGAS programming; minisymposium on HPC applications in physical sciences; minisymposium on high performance computing interval methods; workshop on complex collective systems.

Inside the Message Passing Interface

Inside the Message Passing Interface
Author: Alexander Supalov
Publisher: Walter de Gruyter GmbH & Co KG
Total Pages: 384
Release: 2018-09-24
Genre: Computers
ISBN: 1501506781

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A hands-on guide to writing a Message Passing Interface, this book takes the reader on a tour across major MPI implementations, best optimization techniques, application relevant usage hints, and a historical retrospective of the MPI world, all based on a quarter of a century spent inside MPI. Readers will learn to write MPI implementations from scratch, and to design and optimize communication mechanisms using pragmatic subsetting as the guiding principle. Inside the Message Passing Interface also covers MPI quirks and tricks to achieve best performance. Dr. Alexander Supalov created the Intel Cluster Tools product line, including the Intel MP Library that he designed and led between 2003 and 2015. He invented the common MPICH ABI and also guided Intel efforts in the MPI Forum during the development of the MPI-2.1, MPI-2.2, and MPI-3 standards. Before that, Alexander designed new finite-element mesh-generation methods, contributing to the PARMACS and PARASOL interfaces, and developed the first full MPI-2 and IMPI implementations in the world. He graduated from the Moscow Institute of Physics and Technology in 1990, and earned his PhD in applied mathematics at the Institute of Numerical Mathematics of the Russian Academy of Sciences in 1995. Alexander holds 26 patents (more pending worldwide).

Techniques for Optimizing Applications

Techniques for Optimizing Applications
Author: Rajat P. Garg
Publisher: Prentice Hall PTR
Total Pages: 680
Release: 2002
Genre: Computers
ISBN:

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Software -- Programming Techniques.

High-Performance Computing on the Intel(r) Xeon Phi

High-Performance Computing on the Intel(r) Xeon Phi
Author: Endong Wang
Publisher: Springer
Total Pages: 364
Release: 2014-07-31
Genre:
ISBN: 9783319064871

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The aim of this book is to explain to high-performance computing (HPC) developers how to utilize the Intel(r) Xeon Phi series products efficiently. To that end, it introduces some computing grammar, programming technology and optimization methods for using many-integrated-core (MIC) platforms and also offers tips and tricks for actual use, based on the authors first-hand optimization experience. The material is organized in three sections. The first section, Basics of MIC, introduces the fundamentals of MIC architecture and programming, including the specific Intel MIC programming environment. Next, the section on Performance Optimization explains general MIC optimization techniques, which are then illustrated step-by-step using the classical parallel programming example of matrix multiplication. Finally, Project development presents a set of practical and experience-driven methods for using parallel computing in application projects, including how to determine if a serial or parallel CPU program is suitable for MIC and how to transplant a program onto MIC. This book appeals to two main audiences: First, software developers for HPC applications it will enable them to fully exploit the MIC architecture and thus achieve the extreme performance usually required in biological genetics, medical imaging, aerospace, meteorology and other areas of HPC. Second, students and researchers engaged in parallel and high-performance computing it will guide them on how to push the limits of system performance for HPC applications. "

High-Performance Computing on the Intel® Xeon PhiTM

High-Performance Computing on the Intel® Xeon PhiTM
Author: Endong Wang
Publisher: Springer
Total Pages: 349
Release: 2014-06-26
Genre: Computers
ISBN: 331906486X

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The aim of this book is to explain to high-performance computing (HPC) developers how to utilize the Intel® Xeon PhiTM series products efficiently. To that end, it introduces some computing grammar, programming technology and optimization methods for using many-integrated-core (MIC) platforms and also offers tips and tricks for actual use, based on the authors’ first-hand optimization experience. The material is organized in three sections. The first section, “Basics of MIC”, introduces the fundamentals of MIC architecture and programming, including the specific Intel MIC programming environment. Next, the section on “Performance Optimization” explains general MIC optimization techniques, which are then illustrated step-by-step using the classical parallel programming example of matrix multiplication. Finally, “Project development” presents a set of practical and experience-driven methods for using parallel computing in application projects, including how to determine if a serial or parallel CPU program is suitable for MIC and how to transplant a program onto MIC. This book appeals to two main audiences: First, software developers for HPC applications – it will enable them to fully exploit the MIC architecture and thus achieve the extreme performance usually required in biological genetics, medical imaging, aerospace, meteorology and other areas of HPC. Second, students and researchers engaged in parallel and high-performance computing – it will guide them on how to push the limits of system performance for HPC applications.

Co-Scheduling of HPC Applications

Co-Scheduling of HPC Applications
Author: C. Trinitis
Publisher: IOS Press
Total Pages: 176
Release: 2017-01-05
Genre: Business & Economics
ISBN: 1614997306

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High-performance computing (HPC) has become an essential tool in the modern world. However, systems frequently run well below theoretical peak performance, with only 5% being reached in many cases. In addition, costly components often remain idle when not required for specific programs, as parts of the HPC systems are reserved and used exclusively for applications. A project was started in 2013, funded by the German Ministry of Education and Research (BMBF), to find ways of improving system utilization by compromising on dedicated reservations for HPC codes and applying co-scheduling of applications instead. The need was recognized for international discussion to find the best solutions to this HPC utilization issue, and a workshop on co-scheduling in HPC, open to international participants – the COSH workshop – was held for the first time at the European HiPEAC conference, in Prague, Czech Republic, in January 2016. This book presents extended versions of papers submitted to the workshop, reviewed for the second time to ensure scientific quality. It also includes an introduction to the main challenges of co-scheduling and a foreword by Arndt Bode, head of LRZ, one of Europe's leading computer centers, as well as a chapter corresponding to the invited keynote speech by Intel, whose recent extensions to their processors allow for better control of co-scheduling.

Tools for High Performance Computing 2015

Tools for High Performance Computing 2015
Author: Andreas Knüpfer
Publisher: Springer
Total Pages: 184
Release: 2016-07-27
Genre: Computers
ISBN: 3319395890

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High Performance Computing (HPC) remains a driver that offers huge potentials and benefits for science and society. However, a profound understanding of the computational matters and specialized software is needed to arrive at effective and efficient simulations. Dedicated software tools are important parts of the HPC software landscape, and support application developers. Even though a tool is by definition not a part of an application, but rather a supplemental piece of software, it can make a fundamental difference during the development of an application. Such tools aid application developers in the context of debugging, performance analysis, and code optimization, and therefore make a major contribution to the development of robust and efficient parallel software. This book introduces a selection of the tools presented and discussed at the 9th International Parallel Tools Workshop held in Dresden, Germany, September 2-3, 2015, which offered an established forum for discussing the latest advances in parallel tools.

High-Performance Computing on the Intel® Xeon PhiTM

High-Performance Computing on the Intel® Xeon PhiTM
Author: Endong Wang
Publisher: Springer
Total Pages: 338
Release: 2014-07-11
Genre: Computers
ISBN: 9783319064857

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The aim of this book is to explain to high-performance computing (HPC) developers how to utilize the Intel® Xeon PhiTM series products efficiently. To that end, it introduces some computing grammar, programming technology and optimization methods for using many-integrated-core (MIC) platforms and also offers tips and tricks for actual use, based on the authors’ first-hand optimization experience. The material is organized in three sections. The first section, “Basics of MIC”, introduces the fundamentals of MIC architecture and programming, including the specific Intel MIC programming environment. Next, the section on “Performance Optimization” explains general MIC optimization techniques, which are then illustrated step-by-step using the classical parallel programming example of matrix multiplication. Finally, “Project development” presents a set of practical and experience-driven methods for using parallel computing in application projects, including how to determine if a serial or parallel CPU program is suitable for MIC and how to transplant a program onto MIC. This book appeals to two main audiences: First, software developers for HPC applications – it will enable them to fully exploit the MIC architecture and thus achieve the extreme performance usually required in biological genetics, medical imaging, aerospace, meteorology and other areas of HPC. Second, students and researchers engaged in parallel and high-performance computing – it will guide them on how to push the limits of system performance for HPC applications.