Omics Science for Rhizosphere Biology

Omics Science for Rhizosphere Biology
Author: Ramesh Namdeo Pudake
Publisher: Springer Nature
Total Pages: 279
Release: 2021-05-08
Genre: Science
ISBN: 981160889X

Download Omics Science for Rhizosphere Biology Book in PDF, Epub and Kindle

This book presents a timely review of the latest advances in rhizosphere biology, which have been facilitated by the application of omics tools. It includes chapters on the use of various omics tools in rhizosphere biology, focusing on understanding plant and soil microbe interactions. The role of proteomics and metagenomics in research on symbiotic association is also discussed in detail. The book also includes chapters on the use of omics tools for the isolation of functional biomolecules from rhizospheric microorganisms. The book’s respective sections describe and provide detailed information on important omics tools, such as genomics, transcriptomics, proteomics, metabolomics and meta-epigenomics. In turn, the book promotes and describes the combined use of plant biology, microbial ecology, and soil sciences to design new research strategies and innovative methods in soil biology. Lastly, it highlights the considerable potential of the rhizosphere in terms of crop productivity, bioremediation, ecological engineering, plant nutrition and health, as well as plant adaptation to stress conditions. This book offers both a practical guide and reference source for all scientists working in soil biology, plant pathology, etc. It will also benefit students studying soil microbiology, and researchers studying rhizosphere structure.

Omics in Soil Science

Omics in Soil Science
Author: Paolo Nannipieri
Publisher: Caister Academic Press Limited
Total Pages: 0
Release: 2014
Genre: Science
ISBN: 9781908230324

Download Omics in Soil Science Book in PDF, Epub and Kindle

Advances in understanding soil functionality are being realised by harnessing omics technologies such as metagenomics, metatranscriptomics, proteomics and volatilomics.

Methods in Rhizosphere Biology Research

Methods in Rhizosphere Biology Research
Author: Didier Reinhardt
Publisher: Springer
Total Pages: 279
Release: 2019-03-29
Genre: Medical
ISBN: 9811357676

Download Methods in Rhizosphere Biology Research Book in PDF, Epub and Kindle

This book compiles various methodologies used in understanding interactions within the rhizosphere. An in-depth understanding of the rhizosphere is essential to developing successful strategies for future sustainable agriculture. The book summarizes methods and techniques used to study the mechanisms involved in mutualistic symbioses and pathogenic interactions of plants with various microbial organisms including fungi, bacteria, and oomycetes. Each chapter discusses different methodologies used in rhizosphere biology, while also providing real-world experimental data and trouble-shooting tips. Interested researchers will also find a wealth of literature references for further research. As the first comprehensive manual and compilation of methods and techniques used in rhizosphere biology, the book represents an essential resource for all researchers who are newcomers to soil microbiology experimentation.

The Rhizosphere

The Rhizosphere
Author: Zoe G. Cardon
Publisher: Elsevier
Total Pages: 235
Release: 2011-04-28
Genre: Technology & Engineering
ISBN: 0080493041

Download The Rhizosphere Book in PDF, Epub and Kindle

Below the soil surface, the rhizosphere is the dynamic interface among plant roots, soil microbes and fauna, and the soil itself, where biological as well as physico-chemical properties differ radically from those of bulk soil. The Rhizosphere is the first ecologically-focused book that explicitly establishes the links from extraordinarily small-scale processes in the rhizosphere to larger-scale belowground patterns and processes. This book includes chapters that emphasize the effects of rhizosphere biology on long-term soil development, agro-ecosystem management and responses of ecosystems to global change. Overall, the volume seeks to spur development of cross-scale links for understanding belowground function in varied natural and managed ecosystems. First cross-scale ecologically-focused integration of information at the frontier of root, microbial, and soil faunal biology Establishes the links from extraordinarily small-scale processes in the rhizosphere to larger-scale belowground patterns and processes Includes valuable information on ecosystem response to increased atmospheric carbon dioxide and enhanced global nitrogen deposition Chapters written by a variety of experts, including soil scientists, microbial and soil faunal ecologists, and plant biologists

Rhizosphere Biology: Interactions Between Microbes and Plants

Rhizosphere Biology: Interactions Between Microbes and Plants
Author: Vadakattu V. S. R. Gupta
Publisher: Springer Nature
Total Pages: 356
Release: 2020-08-21
Genre: Medical
ISBN: 9811561257

Download Rhizosphere Biology: Interactions Between Microbes and Plants Book in PDF, Epub and Kindle

This book presents a detailed discussion on the direct interactions of plants and microorganisms in the rhizosphere environment. It includes fifteen chapters, each focusing on a specific component of plant-microbe interactions, such as the influence of plants on the root microbiome, and the downstream effects of rhizosphere microbial dynamics on carbon and nutrient fluxes in the surroundings. As such, the book helps readers gain a better understanding of diversity above the ground, and its effect on the microbiome and its functionality.

The Rhizosphere

The Rhizosphere
Author: Roberto Pinton
Publisher: CRC Press
Total Pages: 472
Release: 2007-05-11
Genre: Science
ISBN: 1420005588

Download The Rhizosphere Book in PDF, Epub and Kindle

In the rhizosphere, exudates from plants and microorganisms as well as stable soil organic matter influence processes that can control plant growth, microbial infections, and nutrient uptake. As the chemistry and biochemistry of these substances becomes more and more clear, their study promises to shed light on the complex interactions between plan

Re-visiting the Rhizosphere Eco-system for Agricultural Sustainability

Re-visiting the Rhizosphere Eco-system for Agricultural Sustainability
Author: Udai B. Singh
Publisher: Springer Nature
Total Pages: 543
Release: 2022-10-28
Genre: Technology & Engineering
ISBN: 9811941017

Download Re-visiting the Rhizosphere Eco-system for Agricultural Sustainability Book in PDF, Epub and Kindle

The present book entitled, “Re-visiting the Rhizosphere Eco-system for Agricultural Sustainability” written by experts in the field, provides a comprehensive and consolidated state-of art overview of various aspects of rhizosphere biology, ecology and functioning. The role of rhizosphere microbial diversity in enhancing plant health and plant-microbe beneficial symbioses is discussed. Main topics include the diversity of plant-associated microbes in the rhizosphere, below-ground communication among the plant, soil, insects and microbes, rhizosphere ecosystem functioning, rhizosphere engineering, recruitment of microorganisms in the rhizosphere, mycorrhizal fungal symbiosis, positive interaction of the plants with the beneficial soil microorganisms for inducing the plant growth, conferring abiotic and biotic stress tolerance and modulating several pathways of the plants for the proper establishment and revitalization in the degraded and contaminated soils or negative likes the host-pathogen interactions leading to the disease development in plants. Further chapters focus on the role of signaling during the different stages of the plant-microbe coexistence, in symbiotic or pathogenic relationships, in quorum sensing, microbial signaling and cross-talk, bio-film formation, and antimicrobial peptides. The book also discusses the application of microbes in biodegradation of xenobiotic contaminants, bioremediation of heavy metals, sustainable agriculture and soil health, biological control of insect pests and plant pathogens, and the latest tools of omics which offer pioneering approaches to the exploration of microbial structure and function, secretome, holobiome, below-ground interaction, and microbial cooperation for sustainable food production and enhanced resource acquisition. Descriptions of cutting-edge techniques and novel approaches make this book unique in the area of rhizosphere biology. This is a useful reading material for researchers and students of microbiology, agriculture, ecology, and rhizosphser studies.

Secondary Metabolites in Soil Ecology

Secondary Metabolites in Soil Ecology
Author: Petr Karlovsky
Publisher: Springer Science & Business Media
Total Pages: 296
Release: 2008-01-03
Genre: Science
ISBN: 3540745432

Download Secondary Metabolites in Soil Ecology Book in PDF, Epub and Kindle

Microbiologists and soil scientists will find this study compelling reading. It focuses on the role of bacterial, fungal and plant secondary metabolites in soil ecosystems. Our understanding of the biological function of secondary metabolites is surprisingly limited, considering our knowledge of their structural diversity and pharmaceutical activity. This book reviews functional aspects of secondary metabolite production, with a focus on interactions among soil organisms.

Omics and its Integration: A Systems Biology Approach to Understanding Plant Physiology

Omics and its Integration: A Systems Biology Approach to Understanding Plant Physiology
Author: Kashif Ali
Publisher: Frontiers Media SA
Total Pages: 155
Release: 2023-11-27
Genre: Science
ISBN: 2832539785

Download Omics and its Integration: A Systems Biology Approach to Understanding Plant Physiology Book in PDF, Epub and Kindle

Due to the complexity and interconnectivity of many biological processes, an integrative systems biology approach is required to better understand them. The integration of various omics data (including genomics, proteomics, transcriptomics, and metabolomics data) will provide a holistic view that highlights the relationship among the various biomolecules and their functions in plant growth, resistance, quality, and many other important traits. Recent advances in analytical power and in the ability to process large data sets has enabled researchers to integrate multi-omics data and have a much deeper knowledge of the cell, tissue, organ, or even an entire organism being studied. The goal of this Research Topic is not only to publish high-quality and reliable omics data but also to answer the bigger question of how to integrate and correlate different data sets from multiple omics studies. Can one omics data set be used as a primary data set for the design and execution of another omics study? If so, then how it can be done? What are its pre-requisites? How can we plan research involving multi-omics approach to reach a meaningful conclusion? These are the questions that need our attention and their answers are critical for the future of omics-based research. For this Research Topic, we welcome contributors to submit manuscripts related to the following themes: • Studies on plant-based genomics, transcriptomics, proteomics, and metabolomics; • Development of new analytical methods for omics utilizing in plants; • Advancements in the current analytical methods for utilizing omics in plants; • Integration of multi-omics data sets; • Development of new statistical methods for data analysis.

Microbial Activity in the Rhizosphere

Microbial Activity in the Rhizosphere
Author: Krishna Gopal Mukerji
Publisher: Springer Science & Business Media
Total Pages: 356
Release: 2006-03-22
Genre: Science
ISBN: 3540294201

Download Microbial Activity in the Rhizosphere Book in PDF, Epub and Kindle

The rhizosphere is a very complex environment in which the effects of the plant on soil microorganisms and the effects of the microorganisms on the plant are interacting and are interdependent. Plant root exudates and breakdownproducts attract microbes and feed them and, in turn, the plants often bene?t from the microbes. Interactions among microorg- ismsandplantrootsareessentialfornutritionalrequirementsoftheplant. Plant growth, development and productivity are largely dependent on the soil environment in the root region rhizosphere. The new techniques of studying the rhizosphere enables us to get a much better understanding of the dynamics of the rhizosphere population, such rhizosphere studies beingofinteresttoagriculturists,soilbiologists,chemists,microbiologists andmolecularbiologists. The rhizosphere microbes in?uence the root environment in several ways. They may change the oxidation-reduction potential, in?uence the availabilityofmoistureandnutrients,producegrowthinhibitingorgrowth promoting substances in the form of exudates, provide competition and possiblyinducemanyothereffects.Mycorrhizalassociationsarebene?cial in mineral uptake and in increasing root surface area for effective ion absorption. Antagonism,competitionandsynergisminsoilandtherhizoplane(r- zosphere) are the most important microbial interactions to consider in the study of rhizosphere biology. With the growing information on the production of growth regulators, competitiveness of the microbes in the rhizosphere, microsymbionts, and other factors, their effect upon plant growth will become more evident. Experiments on the introduction of microbes or their products in the rhizosphere will help to improve our understandingofthebiologyoftherhizosphere.