Computational Genomics with R

Computational Genomics with R
Author: Altuna Akalin
Publisher: CRC Press
Total Pages: 462
Release: 2020-12-16
Genre: Mathematics
ISBN: 1498781861

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Computational Genomics with R provides a starting point for beginners in genomic data analysis and also guides more advanced practitioners to sophisticated data analysis techniques in genomics. The book covers topics from R programming, to machine learning and statistics, to the latest genomic data analysis techniques. The text provides accessible information and explanations, always with the genomics context in the background. This also contains practical and well-documented examples in R so readers can analyze their data by simply reusing the code presented. As the field of computational genomics is interdisciplinary, it requires different starting points for people with different backgrounds. For example, a biologist might skip sections on basic genome biology and start with R programming, whereas a computer scientist might want to start with genome biology. After reading: You will have the basics of R and be able to dive right into specialized uses of R for computational genomics such as using Bioconductor packages. You will be familiar with statistics, supervised and unsupervised learning techniques that are important in data modeling, and exploratory analysis of high-dimensional data. You will understand genomic intervals and operations on them that are used for tasks such as aligned read counting and genomic feature annotation. You will know the basics of processing and quality checking high-throughput sequencing data. You will be able to do sequence analysis, such as calculating GC content for parts of a genome or finding transcription factor binding sites. You will know about visualization techniques used in genomics, such as heatmaps, meta-gene plots, and genomic track visualization. You will be familiar with analysis of different high-throughput sequencing data sets, such as RNA-seq, ChIP-seq, and BS-seq. You will know basic techniques for integrating and interpreting multi-omics datasets. Altuna Akalin is a group leader and head of the Bioinformatics and Omics Data Science Platform at the Berlin Institute of Medical Systems Biology, Max Delbrück Center, Berlin. He has been developing computational methods for analyzing and integrating large-scale genomics data sets since 2002. He has published an extensive body of work in this area. The framework for this book grew out of the yearly computational genomics courses he has been organizing and teaching since 2015.

Melody Design Tools

Melody Design Tools
Author: Stella Tartsinis, DMA
Publisher: Stella Tartsinis
Total Pages: 42
Release: 2020-08-12
Genre: Education
ISBN:

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The guide is divided into four melodic composition tools: basic, intermediate, advance and Counterpoint. It is a guide how to write a good melody to include how to add the melody into musical form. There are practical exercises to practice combining melodic devises and examples showing how these compositional techniques are used in melodic writing.

Unix Power Tools

Unix Power Tools
Author: Shelley Powers
Publisher: "O'Reilly Media, Inc."
Total Pages: 1154
Release: 2003
Genre: Computers
ISBN: 0596003307

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With the growing popularity of Linux and the advent of Darwin, Unix has metamorphosed into something new and exciting. No longer perceived as a difficult operating system, more and more users are discovering the advantages of Unix for the first time. But whether you are a newcomer or a Unix power user, you'll find yourself thumbing through the goldmine of information in the new edition of Unix Power Tools to add to your store of knowledge. Want to try something new? Check this book first, and you're sure to find a tip or trick that will prevent you from learning things the hard way. The latest edition of this best-selling favorite is loaded with advice about almost every aspect of Unix, covering all the new technologies that users need to know. In addition to vital information on Linux, Darwin, and BSD, Unix Power Tools 3rd Edition now offers more coverage of bash, zsh, and other new shells, along with discussions about modern utilities and applications. Several sections focus on security and Internet access. And there is a new chapter on access to Unix from Windows, addressing the heterogeneous nature of systems today. You'll also find expanded coverage of software installation and packaging, as well as basic information on Perl and Python. Unix Power Tools 3rd Edition is a browser's book...like a magazine that you don't read from start to finish, but leaf through repeatedly until you realize that you've read it all. Bursting with cross-references, interesting sidebars explore syntax or point out other directions for exploration, including relevant technical details that might not be immediately apparent. The book includes articles abstracted from other O'Reilly books, new information that highlights program tricks and gotchas, tips posted to the Net over the years, and other accumulated wisdom. Affectionately referred to by readers as "the" Unix book, UNIX Power Tools provides access to information every Unix user is going to need to know. It will help you think creatively about UNIX, and will help you get to the point where you can analyze your own problems. Your own solutions won't be far behind.

Data Warehousing and Mining: Concepts, Methodologies, Tools, and Applications

Data Warehousing and Mining: Concepts, Methodologies, Tools, and Applications
Author: Wang, John
Publisher: IGI Global
Total Pages: 4092
Release: 2008-05-31
Genre: Technology & Engineering
ISBN: 159904952X

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In recent years, the science of managing and analyzing large datasets has emerged as a critical area of research. In the race to answer vital questions and make knowledgeable decisions, impressive amounts of data are now being generated at a rapid pace, increasing the opportunities and challenges associated with the ability to effectively analyze this data.

Unix Power Tools

Unix Power Tools
Author: Jerry Peek
Publisher: "O'Reilly Media, Inc."
Total Pages: 1156
Release: 2002-10-28
Genre: Computers
ISBN: 0596550553

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With the growing popularity of Linux and the advent of Darwin, Unix has metamorphosed into something new and exciting. No longer perceived as a difficult operating system, more and more users are discovering the advantages of Unix for the first time. But whether you are a newcomer or a Unix power user, you'll find yourself thumbing through the goldmine of information in the new edition of Unix Power Tools to add to your store of knowledge. Want to try something new? Check this book first, and you're sure to find a tip or trick that will prevent you from learning things the hard way.The latest edition of this best-selling favorite is loaded with advice about almost every aspect of Unix, covering all the new technologies that users need to know. In addition to vital information on Linux, Darwin, and BSD, Unix Power Tools 3rd Edition now offers more coverage of bash, zsh, and other new shells, along with discussions about modern utilities and applications. Several sections focus on security and Internet access. And there is a new chapter on access to Unix from Windows, addressing the heterogeneous nature of systems today. You'll also find expanded coverage of software installation and packaging, as well as basic information on Perl and Python.Unix Power Tools 3rd Edition is a browser's book...like a magazine that you don't read from start to finish, but leaf through repeatedly until you realize that you've read it all. Bursting with cross-references, interesting sidebars explore syntax or point out other directions for exploration, including relevant technical details that might not be immediately apparent. The book includes articles abstracted from other O'Reilly books, new information that highlights program tricks and gotchas, tips posted to the Net over the years, and other accumulated wisdom.Affectionately referred to by readers as "the" Unix book, UNIX Power Tools provides access to information every Unix user is going to need to know. It will help you think creatively about UNIX, and will help you get to the point where you can analyze your own problems. Your own solutions won't be far behind.

InfoWorld

InfoWorld
Author:
Publisher:
Total Pages: 98
Release: 1993-06-14
Genre:
ISBN:

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InfoWorld is targeted to Senior IT professionals. Content is segmented into Channels and Topic Centers. InfoWorld also celebrates people, companies, and projects.

User-Friendly Tools Applied to Genetics or Systems Biology

User-Friendly Tools Applied to Genetics or Systems Biology
Author: Helder Nakaya
Publisher: Frontiers Media SA
Total Pages: 177
Release: 2020-12-01
Genre: Science
ISBN: 2889661334

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This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact.

Netzstadt

Netzstadt
Author: Franz Oswald
Publisher: Springer Science & Business Media
Total Pages: 320
Release: 2003
Genre: Architecture
ISBN: 9783764369637

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The town is an organism created and driven by people. The complexity of the problems arising from it poses a challenge to those in positions of responsibility. Oswald and Baccini seek to bring clarity to the web of urban phenomena. They present a highly original model which draws together the two separate fields of architecture and science by considering architecture and urban planning from the scientific perspective. In four main chapters, topics such as new urbanism, the net city, designing with the net-city method, sustainability, renovation, conversion, and responsibility are explored in detail. The examples presented all derive from Switzerland, but the analyses and methodology is valid for any region or country. The theory is complemented by attractive visual material. Franz Oswald is Professor of Architecture and Design, Peter Baccini is Professor of Resource and Waste Management (both at Zurich ETH).

Research and Technology

Research and Technology
Author: Goddard Space Flight Center
Publisher:
Total Pages: 244
Release: 1991
Genre: Astronautics
ISBN:

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Tool Integration

Tool Integration
Author: D. Schefström
Publisher:
Total Pages: 488
Release: 1993-03-16
Genre: Computers
ISBN:

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Uses actual experiences of practitioners in the field to survey issues regarding the building of integrated systems engineering environments. Coverage includes design techniques, tools, problems confronted and their solutions. Features a detailed discussion of integration.