Converging Chemical and Cell-based Approaches for Improved Non-viral Gene Delivery

Converging Chemical and Cell-based Approaches for Improved Non-viral Gene Delivery
Author: Federica Ponti
Publisher:
Total Pages: 0
Release: 2023
Genre:
ISBN:

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Non-viral gene delivery strategies have attracted significant interest in the development of novel therapeutic approaches as well as for basic and applied research in vitro. Compared to popular viral vectors, the class of non-viral carriers, namely cationic lipids (CLs) and polymers (CPs) able to spontaneously interact with negatively charged nucleic acids (NAs) to give nanoparticles called complexes, is now witnessing a surge of interest within the scientific community because they are relatively safe, cost-effective, and they can be easily produced and functionalized even at large scale. However, their efficiency in achieving the delivery tasks is still too low to outperform their viral counterparts. The efficacy of non-viral vectors is a tradeoff between their ability to drive NAs into cells, thus allowing/inhibiting their expression, their inherent toxicity, and their ability to deliver genes to target cells. Extensive research effort has thus been put into developing novel ways to improve the efficiency of such a class of delivery systems. In this context, my Ph.D. aimed at developing innovative strategies to improve non-viral vector effectiveness. To this purpose, we dealt with the delivery issue from two different perspectives: on one hand, the modulation of the vector chemistry was disclosed as a way to develop multifunctional carriers with improved effectiveness; on the other hand, we sought to improve cell-(nano)particles' interactions through the mechanical modulation of the cell behavior in response to the delivery of non-viral vectors. The first part of this thesis was thus aimed at highlighting the importance of vector chemistry on the structure-function relationship of such kinds of materials, with a focus on lipid-based carriers. Furthermore, I dealt with the characterization of a novel class of lipid-based vectors to investigate the interconnection between their structure and ultimate gene transfer ability. This thesis next explored novel ways to improve the performances of polyethyleneimine (PEI), namely the gold standard polymer vector, both in linear (lPEI) and branched (bPEI) topography. First, a thorough investigation of all the experimental variables affecting the performances of PEI-based polyplexes was carried out to disclose the best working conditions of PEI-based carriers and improve the standardization of in vitro screening protocols. Next, I focused on the development of a vector-based approach to functionalize bPEI with targeting moieties to improve the vector's selectivity towards a specific cell type. We thus synthesized a series of bPEI conjugates incorporating targeting peptides to selectively deliver genes to vascular smooth muscle cells (vSMCs). Moreover, the targeting vectors were incorporated into a polyplex releasing matrix to enable their local and controlled release for cardiovascular-related approaches. Through the conjugation of an elastin-derived peptide sequence to the bPEI structure, we were able to improve the polymer's effectiveness on target vSMCs while leaving off-target cells unaffected, a fact that is especially relevant for the translation of non-viral gene delivery approaches in vivo. On the other side, a novel strategy based on the regulation of cell response to the delivery of nanoparticles was devised. Indeed, cells in vivo are constantly subjected to different environmental cues that govern some key cell functions. We thus investigated the application of an exogenous mechanical stimulus in terms of vibrational loading to cells undergoing transfection (i.e., the delivery of NAs utilizing non-viral vectors) using lPEI and bPEI-based polyplexes. Interestingly, mechanical stimuli applied to cells improved polyplex internalization by triggering the activation of clathrin-mediated endocytosis (CME), thus leading to greater transfection outcomes. This strategy outlined the importance of cell responses to exogenous cues on the ultimate internalization and expression of a gene of interest and set the stage for a novel way to deal with the non-viral delivery issue. Overall, the big picture drawn by this Ph.D. project highlighted the suitability of chemical-based approaches and cell-based approaches as promising ways to improve non-viral vector effectiveness. Further improvement in non-viral gene delivery research might be achieved by combining the strategies devised in this project. The development of multidisciplinary approaches taking into account both the delivery vector, the environment in which the delivery of genes takes place, and the cell response may thus pave the way to ever more effective strategies, and expedite the translation from the bench to the bedside of these materials.

Investigation of Barriers to Non-viral Gene Delivery and Design of Novel Polymer-based Gene Delivery Systems

Investigation of Barriers to Non-viral Gene Delivery and Design of Novel Polymer-based Gene Delivery Systems
Author: Akin Akinc
Publisher:
Total Pages: 252
Release: 2003
Genre:
ISBN:

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The safe and effective delivery of therapeutic genes is the most significant challenge facing gene therapy today. Viral vectors remain the dominant approach for addressing the delivery problem; however, concerns regarding the safety of viral vectors have resulted in an increasing interest in non-viral vectors. Non-viral vectors offer the promise of improved safety, but because they have yet to match the functional sophistication of viral vectors, their transfection efficiencies have lagged those of viral vectors. The rational design of functional non-viral vectors requires a thorough understanding of both the cell's sophisticated machinery and the vector material's functional properties. We have developed a novel, flow cytometry based tool for investigating both the cellular uptake and lysosomal trafficking of non-viral vectors, two important barriers to efficient gene transfer. Using this and other tools we investigated the gene transfer properties of polyethylenimine (PEI), a highly effective non-viral vector material. We demonstrated that the transfection efficiency of this polymer is due to its ability to avoid lysosomal degradation as a result of its buffering capacity, providing quantitative validation of the proton sponge hypothesis. By studying the gene transfer properties of a library of polymeric vectors, we were able to elucidate new vector structure-function relationships. We also investigated the combined impact of non-structural factors-such as polymer molecular weight, polymer chain end-group, and polymer/DNA ratio-on gene transfer. The findings of these studies have lead to the development of non-viral vectors with transfection efficiencies surpassing those of PEI and Lipofectamine 2000, two of the best commercially available non-viral vectors.

Gene Delivery to Mammalian Cells

Gene Delivery to Mammalian Cells
Author: William C. Heiser
Publisher: Humana Press
Total Pages: 566
Release: 2003-10-28
Genre: Science
ISBN: 9781588290953

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The efficiency of delivering DNA into mammalian cells has increased t- mendously since DEAE dextran was first shown to be capable of enhancing transfer of RNA into mammalian cells in culture. Not only have other chemical methods been developed and refined, but also very efficient physical and viral delivery methods have been established. The technique of introducing DNA into cells has developed from transfecting tissue culture cells to delivering DNA to specific cell types and organs in vivo. Moreover, two important areas of biology—assessment of gene function and gene therapy—require succe- ful DNA delivery to cells, driving the practical need to increase the efficiency and efficacy of gene transfer both in vitro and in vivo. TM These two volumes of the Methods in Molecular Biology series, Gene Del- ery to Mammalian Cells, are designed as a compendium of those techniques that have proven most useful in the expanding field of gene transfer in mammalian cells. It is intended that these volumes will provide a thorough background on chemical, physical, and viral methods of gene delivery, a synopsis of the myriad techniques currently available to introduce genes into mammalian cells, as well as a practical guide on how to accomplish this. It is my expectation that it will be useful to the novice in the field as well as to the scientist with expertise in gene delivery.

Nonviral Vectors for Gene Therapy

Nonviral Vectors for Gene Therapy
Author: Mien-Chie Hung
Publisher: Elsevier
Total Pages: 471
Release: 1999-07-01
Genre: Science
ISBN: 0080479774

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Gene transfer within humans has been an obstacle until about 10 years ago. At that time, it was found that viral vectors were effective carriers of "healthy genes" into patients' cells. The problem, however, was that viral vectors proved unnecessarily harmful to humans: subjects experienced inflamatory activity and negative immunological responses to the genes. Viral vectors were also unable to meet the needs of the pharmaceutical community: they were not reproducible in large-scale proportions in cost-effective ways. Thus, research was undertaken to find a safer way to transfer genes to patients without jeopardizing the safety of the patient. And so non-viral vectors were discovered. This volume presents the various non-viral vectors currently under development. Although not methodologically oriented, it will provide the necessary details behind the development of the vectors. This information will prove useful to both researchers and clinicians. Key Features * Presents state-of-the art developments of nonviral vectors as tools for modern molecular medicine * Covers all types of nonviral vectors, from molecular structure to therapeutic application Provides a comprehensive review of synthetic vectors * Includes contributions from major investigators and leading experts in the field

Oversight and Review of Clinical Gene Transfer Protocols

Oversight and Review of Clinical Gene Transfer Protocols
Author: Institute of Medicine
Publisher: National Academies Press
Total Pages: 78
Release: 2014-03-27
Genre: Medical
ISBN: 030929665X

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Gene transfer research is a rapidly advancing field that involves the introduction of a genetic sequence into a human subject for research or diagnostic purposes. Clinical gene transfer trials are subject to regulation by the U.S. Food and Drug Administration (FDA) at the federal level and to oversight by institutional review boards (IRBs) and institutional biosafety committees (IBCs) at the local level before human subjects can be enrolled. In addition, at present all researchers and institutions funded by the National Institutes of Health (NIH) are required by NIH guidelines to submit human gene transfer protocols for advisory review by the NIH Recombinant DNA Advisory Committee (RAC). Some protocols are then selected for individual review and public discussion. Oversight and Review of Clinical Gene Transfer Protocols provides an assessment of the state of existing gene transfer science and the current regulatory and policy context under which research is investigated. This report assesses whether the current oversight of individual gene transfer protocols by the RAC continues to be necessary and offers recommendations concerning the criteria the NIH should employ to determine whether individual protocols should receive public review. The focus of this report is on the standards the RAC and NIH should use in exercising its oversight function. Oversight and Review of Clinical Gene Transfer Protocols will assist not only the RAC, but also research institutions and the general public with respect to utilizing and improving existing oversight processes.

Therapeutic Oligonucleotides

Therapeutic Oligonucleotides
Author: Jens Kurreck
Publisher: Royal Society of Chemistry
Total Pages: 362
Release: 2008
Genre: Medical
ISBN: 0854041168

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This book provides a compelling overall update on current status of RNA interference

Biodefense in the Age of Synthetic Biology

Biodefense in the Age of Synthetic Biology
Author: National Academies of Sciences, Engineering, and Medicine
Publisher: National Academies Press
Total Pages: 189
Release: 2019-01-05
Genre: Technology & Engineering
ISBN: 0309465184

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Scientific advances over the past several decades have accelerated the ability to engineer existing organisms and to potentially create novel ones not found in nature. Synthetic biology, which collectively refers to concepts, approaches, and tools that enable the modification or creation of biological organisms, is being pursued overwhelmingly for beneficial purposes ranging from reducing the burden of disease to improving agricultural yields to remediating pollution. Although the contributions synthetic biology can make in these and other areas hold great promise, it is also possible to imagine malicious uses that could threaten U.S. citizens and military personnel. Making informed decisions about how to address such concerns requires a realistic assessment of the capabilities that could be misused. Biodefense in the Age of Synthetic Biology explores and envisions potential misuses of synthetic biology. This report develops a framework to guide an assessment of the security concerns related to advances in synthetic biology, assesses the levels of concern warranted for such advances, and identifies options that could help mitigate those concerns.

Converging Technologies for Improving Human Performance

Converging Technologies for Improving Human Performance
Author: Mihail C. Roco
Publisher: Springer Science & Business Media
Total Pages: 477
Release: 2013-04-17
Genre: Technology & Engineering
ISBN: 9401703590

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M. C. Roco and W.S. Bainbridge In the early decades of the 21st century, concentrated efforts can unify science based on the unity of nature, thereby advancing the combination of nanotechnology, biotechnology, information technology, and new technologies based in cognitive science. With proper attention to ethical issues and societal needs, converging in human abilities, societal technologies could achieve a tremendous improvement outcomes, the nation's productivity, and the quality of life. This is a broad, cross cutting, emerging and timely opportunity of interest to individuals, society and humanity in the long term. The phrase "convergent technologies" refers to the synergistic combination of four major "NBIC" (nano-bio-info-cogno) provinces of science and technology, each of which is currently progressing at a rapid rate: (a) nanoscience and nanotechnology; (b) biotechnology and biomedicine, including genetic engineering; (c) information technology, including advanced computing and communications; (d) cognitive science, including cognitive neuroscience. Timely and Broad Opportunity. Convergence of diverse technologies is based on material unity at the nanoscale and on technology integration from that scale.

Cell Culture Engineering

Cell Culture Engineering
Author: Wei-Shu Hu
Publisher: Springer
Total Pages: 179
Release: 2006-08-16
Genre: Science
ISBN: 3540340076

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Since the introduction of recombinant human growth hormone and insulin a quarter century ago, protein therapeutics has greatly broadened the ho- zon of health care. Many patients suffering with life-threatening diseases or chronic dysfunctions, which were medically untreatable not long ago, can attest to the wonder these drugs have achieved. Although the ?rst generation of p- tein therapeutics was produced in recombinant Escherichia coli, most recent products use mammalian cells as production hosts. Not long after the ?rst p- duction of recombinant proteins in E. coli, it was realized that the complex tasks of most post-translational modi?cations on proteins could only be ef?ciently carried out in mammalian cells. In the 1990s, we witnessed a rapid expansion of mammalian-cell-derived protein therapeutics, chie?y antibodies. In fact, it has been nearly a decade since the market value of mammalian-cell-derived protein therapeutics surpassed that of those produced from E. coli. A common characteristic of recent antibody products is the relatively large dose required for effective therapy, demanding larger quantities for the treatment of a given disease. This, coupled with the broadening repertoire of protein drugs, has rapidly expanded the quantity needed for clinical applications. The increasing demand for protein therapeutics has not been met exclusively by construction of new manufacturing plants and increasing total volume capacity. More - portantly the productivity of cell culture processes has been driven upward by an order of magnitude in the past decade.

Cell and Gene Therapies

Cell and Gene Therapies
Author: Miguel-Angel Perales
Publisher: Springer
Total Pages: 288
Release: 2018-11-27
Genre: Medical
ISBN: 3319543687

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In this book, experts in the field express their well-reasoned opinions on a range of complex, clinically relevant issues across the full spectrum of cell and gene therapies with the aim of providing trainee and practicing hematologists, including hematopoietic transplant physicians, with information that is relevant to clinical practice and ongoing research. Each chapter focuses on a particular topic, and the concise text is supported by numerous working tables, algorithms, and figures. Whenever appropriate, guidance is provided regarding the availability of potentially high-impact clinical trials. The rapid evolution of cell and gene therapies is giving rise to numerous controversies that need to be carefully addressed. In meeting this challenge, this book will appeal to all residents, fellows, and faculty members responsible for the care of hematopoietic cell transplant patients. It will also offer a robust, engaging tool to aid vital activities in the daily work of every hematology and oncology trainee.