Construction of Fundamental Data Structures for Strings

Construction of Fundamental Data Structures for Strings
Author: Felipe A. Louza
Publisher: Springer Nature
Total Pages: 104
Release: 2020-10-07
Genre: Computers
ISBN: 3030551083

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This books reviews recent theoretical and practical advances on suffix sorting and introduces algorithmic solutions to problems of wide interest for the construction of fundamental data structures that operate efficiently on strings namely, constructing the suffix array, the longest common prefix (LCP) array, the document array and the Lyndon array. These data structures are the cornerstone of many algorithmic solutions in Bioiformatics, Information Retrieval and Data Compression. This book introduces the relevant problem areas, their importance, the notation and related algorithms and then presents the algorithmic solutions for indexing data structure constructions. This book is intended for graduate students, researchers and practitioners from Computer Science and Bioinformatics with a strong interest in algorithmic aspects.

Classic Data Structures in Java

Classic Data Structures in Java
Author: Timothy Budd
Publisher: Addison Wesley
Total Pages: 630
Release: 2001
Genre: Computers
ISBN:

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With this book, Tim Budd looks at data structures by providing a solid foundation on the ADT, and uses the graphical elements found in Java when possible. The beginning chapters provide the foundation on which everything else will be built. These chapters define the essential concept of the abstract data type (ADT), and describe the tools used in the evaluation and analysis of data structures. The book moves on to provide a detailed description of the two most important fundamental data abstractions, the vector and the linked list, providing an explanation of some of the more common variations on these fundamental ideas. Next, the material considers data structures applicable to problems in which the order that values are added to a collection is important, followed by a consideration of the various different ways in which binary trees are used in the creation of data structures. The last few chapters consider a sequence of more advanced data structures. Most are constructed as adaptors built on top of earlier abstractions. Hash tables are introduced first as a technique for implementing simple collections, and later as a tool for developing efficient maps. Lastly, the graph data type is considered. Here there are several alternative data structures presentations in common use, and the emphasis in this chapter is more on the development and analysis of useful algorithms than on any particular data structure.

Data Structure and Algorithms Using C++

Data Structure and Algorithms Using C++
Author: Sachi Nandan Mohanty
Publisher: John Wiley & Sons
Total Pages: 416
Release: 2021-01-12
Genre: Computers
ISBN: 1119752043

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Everyone knows that programming plays a vital role as a solution to automate and execute a task in a proper manner. Irrespective of mathematical problems, the skills of programming are necessary to solve any type of problems that may be correlated to solve real life problems efficiently and effectively. This book is intended to flow from the basic concepts of C++ to technicalities of the programming language, its approach and debugging. The chapters of the book flow with the formulation of the problem, it's designing, finding the step-by-step solution procedure along with its compilation, debugging and execution with the output. Keeping in mind the learner’s sentiments and requirements, the exemplary programs are narrated with a simple approach so that it can lead to creation of good programs that not only executes properly to give the output, but also enables the learners to incorporate programming skills in them. The style of writing a program using a programming language is also emphasized by introducing the inclusion of comments wherever necessary to encourage writing more readable and well commented programs. As practice makes perfect, each chapter is also enriched with practice exercise questions so as to build the confidence of writing the programs for learners. The book is a complete and all-inclusive handbook of C++ that covers all that a learner as a beginner would expect, as well as complete enough to go ahead with advanced programming. This book will provide a fundamental idea about the concepts of data structures and associated algorithms. By going through the book, the reader will be able to understand about the different types of algorithms and at which situation and what type of algorithms will be applicable.

Advanced R

Advanced R
Author: Hadley Wickham
Publisher: CRC Press
Total Pages: 669
Release: 2015-09-15
Genre: Mathematics
ISBN: 1498759807

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An Essential Reference for Intermediate and Advanced R Programmers Advanced R presents useful tools and techniques for attacking many types of R programming problems, helping you avoid mistakes and dead ends. With more than ten years of experience programming in R, the author illustrates the elegance, beauty, and flexibility at the heart of R. The book develops the necessary skills to produce quality code that can be used in a variety of circumstances. You will learn: The fundamentals of R, including standard data types and functions Functional programming as a useful framework for solving wide classes of problems The positives and negatives of metaprogramming How to write fast, memory-efficient code This book not only helps current R users become R programmers but also shows existing programmers what’s special about R. Intermediate R programmers can dive deeper into R and learn new strategies for solving diverse problems while programmers from other languages can learn the details of R and understand why R works the way it does.

Compressed Data Structures for Strings

Compressed Data Structures for Strings
Author: Rossano Venturini
Publisher: Springer Science & Business Media
Total Pages: 131
Release: 2013-10-31
Genre: Computers
ISBN: 9462390339

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Data compression is mandatory to manage massive datasets, indexing is fundamental to query them. However, their goals appear as counterposed: the former aims at minimizing data redundancies, whereas the latter augments the dataset with auxiliary information to speed up the query resolution. In this monograph we introduce solutions that overcome this dichotomy. We start by presenting the use of optimization techniques to improve the compression of classical data compression algorithms, then we move to the design of compressed data structures providing fast random access or efficient pattern matching queries on the compressed dataset. These theoretical studies are supported by experimental evidences of their impact in practical scenarios.

String Processing and Information Retrieval

String Processing and Information Retrieval
Author: Thierry Lecroq
Publisher: Springer Nature
Total Pages: 257
Release: 2021-09-27
Genre: Computers
ISBN: 3030866920

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This book constitutes the refereed proceedings of the 27th International Symposium on String Processing and Information Retrieval, SPIRE 2021, held in Lille, France, in October 2021.* The 14 full papers and 4 short papers presented together with 2 invited papers in this volume were carefully reviewed and selected from 30 submissions. They cover topics such as: data structures; algorithms; information retrieval; compression; combinatorics on words; and computational biology. *The symposium was held virtually.

Data Structures And Algorithms

Data Structures And Algorithms
Author: Shi-kuo Chang
Publisher: World Scientific
Total Pages: 361
Release: 2003-09-29
Genre: Computers
ISBN: 9814486159

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This is an excellent, up-to-date and easy-to-use text on data structures and algorithms that is intended for undergraduates in computer science and information science. The thirteen chapters, written by an international group of experienced teachers, cover the fundamental concepts of algorithms and most of the important data structures as well as the concept of interface design. The book contains many examples and diagrams. Whenever appropriate, program codes are included to facilitate learning.This book is supported by an international group of authors who are experts on data structures and algorithms, through its website at www.cs.pitt.edu/~jung/GrowingBook/, so that both teachers and students can benefit from their expertise.

Handbook of Computational Molecular Biology

Handbook of Computational Molecular Biology
Author: Srinivas Aluru
Publisher: CRC Press
Total Pages: 1108
Release: 2005-12-21
Genre: Computers
ISBN: 1420036270

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The enormous complexity of biological systems at the molecular level must be answered with powerful computational methods. Computational biology is a young field, but has seen rapid growth and advancement over the past few decades. Surveying the progress made in this multidisciplinary field, the Handbook of Computational Molecular Biology of

String Processing and Information Retrieval

String Processing and Information Retrieval
Author: Nieves R. Brisaboa
Publisher: Springer Nature
Total Pages: 537
Release: 2019-10-05
Genre: Computers
ISBN: 3030326861

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This volume constitutes the refereed proceedings of the 26th International Symposium on String Processing and Information Retrieval, SPIRE 2019, held in Segovia, Spain, in October 2019. The 28 full papers and 8 short papers presented in this volume were carefully reviewed and selected from 59 submissions. They cover topics such as: data compression; information retrieval; string algorithms; algorithms; computational biology; indexing and compression; and compressed data structures.