Characterization of the Role of the Small Ubiquitin-like Modifier (SUMO) on Nuclear Localization and Proteolysis of the Thyroid Hormone Receptor (TR)

Characterization of the Role of the Small Ubiquitin-like Modifier (SUMO) on Nuclear Localization and Proteolysis of the Thyroid Hormone Receptor (TR)
Author: Amanda M. Back
Publisher:
Total Pages:
Release: 2017
Genre: Proteins
ISBN:

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The small ubiquitin-like modifier (SUMO) is involved in post-translational modification of proteins and is characterized by its role in regulation of a variety of cellular processes. The objective of this thesis was to characterize the role SUMO has in modification of the thyroid hormone receptor (TR). TR is a regulatory transcription factor that, in most cases when the ligand (T3) is not bound, represses gene expression through the recruitment of co-repressors. When T3 is bound to TR, the co-repressors are released and co-activators are recruited, resulting in positive gene expression mediated by a particular thyroid hormone response element (TRE). Previous research has identified the import and export proteins involved in nuclear localization of TR. Post-translational modification, however, has only begun to be characterized. In terms of proteolysis, TR is degraded through poly-ubiquitination; but it is unclear whether ubiquitin binding is correlated with sumoylation. SUMO sites for TR have been previously identified, and their role in TR-mediated gene expression demonstrated. Here, the role SUMO plays in nuclear localization and proteolysis of TR through its interaction with ubiquitin binding is characterized. Mutant constructs of TR that could not be sumoylated were synthesized and cloned into GFP. For nuclear localization assays, the constructs were transfected into HeLa cells and quantitatively scored for the ratio of fluorescence intensity in the nucleus versus the cytosol using region of interest (ROI) analysis. Coimmunoprecipitation followed by western analysis, was conducted in order to identify the relationship between sumoylation and ubiquitination. The nuclear localization experiments showed no changes in nuclear localization of the SUMO-deficient TR compared to the wild-type TR. Coimmunoprecipitation suggested that there may be a higher level of ubiquitination when TR was not sumoylated. However, varying levels of cellular ubiquitin make this finding inconclusive. Overall, this thesis demonstrates that SUMO is not directly involved in nuclear localization of TR; however, it may play a role in enhancing the binding of ubiquitin, ultimately suggesting that sumoylation may be involved in proteolysis of TR.

Cumulated Index Medicus

Cumulated Index Medicus
Author:
Publisher:
Total Pages: 1872
Release: 1998
Genre: Medicine
ISBN:

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Ubiquitin and the Biology of the Cell

Ubiquitin and the Biology of the Cell
Author: Jan-Michael Peters
Publisher: Springer Science & Business Media
Total Pages: 498
Release: 1998-05-31
Genre: Science
ISBN: 0306456494

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The last several years have been a landmark period in the ubiquitin field. The breadth of ubiquitin's roles in cell biology was first sketched, and the importance of ubiquitin-dependent proteolysis as a regulatory mechanism gained general acceptance. The many strands of work that led to this new perception are re counted in this book. A consequence of this progress is that the field has grown dramatically since the first book on ubiquitin was published almost a decade ago [M. Rechsteiner (ed. ), Ubiquitin, Plenum Press, 1988]. In this span, students of the cell cycle, transcription, signal transduction, protein sorting, neuropathology, cancer, virology, and immunology have attempted to chart the role of ubi quit in in their particular experimental systems, and this integration of the field into cell biology as a whole continues at a remarkable pace. We hope that for active researchers in the field as well as for newcomers and those on the fence, this book will prove helpful for its breadth, historical perspective, and practical tips. Structural data are now available on many of the components of the ubiquitin pathway. The structures have provided basic insights into the unusual biochemical mechanisms of ubiquitination and proteasome-mediated proteolysis. Because high-speed computer graphics can convey structures more effectively than print media, we have supplemented the figures of the book with a Worldwide Web site that can display the structures in a flexible, viewer-controlled format.

Plant Meiosis

Plant Meiosis
Author: Mónica Pradillo
Publisher: Humana
Total Pages: 410
Release: 2019-10-23
Genre: Science
ISBN: 9781493998173

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This volume looks at the latest techniques used by the meiosis research community to study plant meiosis. The chapters in this book are organized into four parts: Part One discusses cytological and imaging approaches to study meiosis and chromosome dynamics in Arabidopsis (in both diploid and polyploid backgrounds); Part Two talks about using cytological methods to study meiosis in other plant species; Part Three focuses on molecular and biochemical approaches to look at plant meiosis; and Part Four explores further procedures and experiments that are helpful in learning more about plant meiosis. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Thorough and cutting-edge, Plant Meiosis: Methods and Protocols is a valuable resource for both novice and expert researchers who are interested in learning more about this developing field.

Plant Meiosis

Plant Meiosis
Author: Wojtek Pawlowski
Publisher: Humana Press
Total Pages: 0
Release: 2013-04-05
Genre: Science
ISBN: 9781627033329

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Meiosis is one of the most critical processes in eukaryotes, required for continuation of species and generation of new variation. In plants, meiotic recombination is by far the most important source of genetic variation. In Plant Meiosis: Methods and Protocols, expert researchers in the field detail methods for molecular cytogenetics and chromosome analysis in plants. These state-of -the-art protocols allow studying the organization and behavior of the genetic material in a wide range of both model and crop species. Written in the highly successful Methods in Molecular BiologyTMseries format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step and readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Plant Meiosis: Methods and Protocols provides and extensive list of protocols developed and used in a number of laboratories at the cutting edge of meiosis and chromosome research.

Receptor Tyrosine Kinases: Structure, Functions and Role in Human Disease

Receptor Tyrosine Kinases: Structure, Functions and Role in Human Disease
Author: Deric L. Wheeler
Publisher: Springer
Total Pages: 452
Release: 2014-11-26
Genre: Science
ISBN: 1493920537

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Receptor Tyrosine Kinase: Structure, Functions and Role in Human Disease, for the first time, systematically covers the shared structural and functional features of the RTK family. Receptor Tyrosine Kinases (RTKs) play critical roles in embryogenesis, normal physiology and several diseases. And over the last decade they have become the Number 1 targets of cancer drugs. To be able to conduct fundamental research or to attempt to develop pharmacological agents able to enhance or intercept them, it is essential first to understand the evolutionary origin of the 58 RTKs and their roles in invertebrates and in humans, as well as downstream signaling pathways. The assembly of chapters is written by experts and underscores commonalities between and among the RTKs. It is an ideal companion volume to The Receptor Tyrosine Kinase: Families and Subfamilies, which proceeds, family by family through all of the specific subfamilies of RTKs, along with their unique landmarks.

Split Inteins

Split Inteins
Author: Henning D. Mootz
Publisher: Humana
Total Pages: 0
Release: 2016-10-07
Genre: Science
ISBN: 9781493964499

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This volume focuses on applications of split inteins, and the progress that has been made in the past 5 years on discovery and engineering of fast and more efficient split inteins. The first few chapters in Split Inteins: Methods and Protocols explore new techniques on how to use split inteins for affinity purification of overproduced proteins, and split-intein based technologies to prepare cyclic peptides and proteins. The next few chapters discuss semisynthetic protein trans-splicing using one synthetic intein piece, synthetic intein-extein pieces used to deliver other cargos for chemical modification both of purified proteins and of proteins in living cells, as well as isotopic labeling of proteins for NMR studies, and a discussion on how protein block copolymers can be generated by protein trans-splicing to form protein hydrogels. The last few chapters deal with intein applications in transgenic plants and conditional inteins that can be regulated in artificial ways by small molecules or light, a cassette-based approach to quickly test many intein insertion positions, and a computational approach to predict new intein split sites (the approach also works for other proteins). Written in the highly successful Methods in Molecular Biology series format, chapters include introduction to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and thorough, Split Inteins: Methods and Protocols is a valuable resource that will provide guidance toward possibilities of split intein applications, explore proven and detailed protocols adaptable to various research projects, and inspire new method developments.

Recent Advances in Glucocorticoid Receptor Action

Recent Advances in Glucocorticoid Receptor Action
Author: A. Cato
Publisher: Springer Science & Business Media
Total Pages: 410
Release: 2013-04-17
Genre: Science
ISBN: 3662046601

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The long-term use of glucocorticoids is associated with several deleterious effects. Attempts to separate the beneficial from the adverse effects of these compounds have met with varying degrees of difficulty. The discovery of distinct modes of action of the glucocorticoid receptor, the protein that mediates glucocorticoid action has opened up many possibilities for improving glucocorticoid therapy. This book provides an in-depth overview of the molecular actions of the glucocorticoid receptor and discusses the chances of an imminent identification of selective glucocorticoid agonists. Such componds should fulfill all the criteria of a glucocorticoid but should lack the sideeffects so far linked with classical glucocorticoids.

Proteostasis and Disease

Proteostasis and Disease
Author: Rosa Barrio
Publisher: Springer Nature
Total Pages: 350
Release: 2020-04-09
Genre: Science
ISBN: 3030382664

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This book, written by members of the European network PROTEOSTASIS, provides an up-to-date review of the research regarding protein homeostasis in health and disease. With new discoveries contributing to the increasing complexity of this topic, the book offers a detailed overview of the pathways regulating protein homeostasis, including autophagy and the ubiquitin protein family. Following a basic introduction, it explains how defects in protein homeostasis contribute to numerous pathologies, including cancer, neurodegeneration, inflammation and a number of rare diseases. In addition, it discusses, the role of protein homeostasis in cellular development and physiology. Highlighting the latest research in the field of protein homeostasis and its implications for various clinically relevant diseases, the book appeals to researchers and clinicians, while also offering a reference guide for scholars who are new to the field.