Genomic Sequence Analysis for Exon Prediction Using Adaptive Signal Processing Algorithms

Genomic Sequence Analysis for Exon Prediction Using Adaptive Signal Processing Algorithms
Author: Md. Zia Ur Rahman
Publisher: CRC Press
Total Pages: 202
Release: 2021-06-30
Genre: Science
ISBN: 1000375153

Download Genomic Sequence Analysis for Exon Prediction Using Adaptive Signal Processing Algorithms Book in PDF, Epub and Kindle

This book addresses the issue of improving the accuracy in exon prediction in DNA sequences using various adaptive techniques based on different performance measures that are crucial in disease diagnosis and therapy. First, the authors present an overview of genomics engineering, structure of DNA sequence and its building blocks, genetic information flow in a cell, gene prediction along with its significance, and various types of gene prediction methods, followed by a review of literature starting with the biological background of genomic sequence analysis. Next, they cover various theoretical considerations of adaptive filtering techniques used for DNA analysis, with an introduction to adaptive filtering, properties of adaptive algorithms, and the need for development of adaptive exon predictors (AEPs) and structure of AEP used for DNA analysis. Then, they extend the approach of least mean squares (LMS) algorithm and its sign-based realizations with normalization factor for DNA analysis. They also present the normalized logarithmic-based realizations of least mean logarithmic squares (LMLS) and least logarithmic absolute difference (LLAD) adaptive algorithms that include normalized LMLS (NLMLS) algorithm, normalized LLAD (NLLAD) algorithm, and their signed variants. This book ends with an overview of the goals achieved and highlights the primary achievements using all proposed techniques. This book is intended to provide rigorous use of adaptive signal processing algorithms for genetic engineering, biomedical engineering, and bioinformatics and is useful for undergraduate and postgraduate students. This will also serve as a practical guide for Ph.D. students and researchers and will provide a number of research directions for further work. Features Presents an overview of genomics engineering, structure of DNA sequence and its building blocks, genetic information flow in a cell, gene prediction along with its significance, and various types of gene prediction methods Covers various theoretical considerations of adaptive filtering techniques used for DNA analysis, introduction to adaptive filtering, properties of adaptive algorithms, need for development of adaptive exon predictors (AEPs), and structure of AEP used for DNA analysis Extends the approach of LMS algorithm and its sign-based realizations with normalization factor for DNA analysis Presents the normalized logarithmic-based realizations of LMLS and LLAD adaptive algorithms that include normalized LMLS (NLMLS) algorithm, normalized LLAD (NLLAD) algorithm, and their signed variants Provides an overview of the goals achieved and highlights the primary achievements using all proposed techniques Dr. Md. Zia Ur Rahman is a professor in the Department of Electronics and Communication Engineering at Koneru Lakshmaiah Educational Foundation (K. L. University), Guntur, India. His current research interests include adaptive signal processing, biomedical signal processing, genetic engineering, medical imaging, array signal processing, medical telemetry, and nanophotonics. Dr. Srinivasareddy Putluri is currently a Software Engineer at Tata Consultancy Services Ltd., Hyderabad. He received his Ph.D. degree (Genomic Signal Processing using Adaptive Signal Processing algorithms) from the Department of Electronics and Communication Engineering at Koneru Lakshmaiah Educational Foundation (K. L. University), Guntur, India. His research interests include genomic signal processing and adaptive signal processing. He has published 15 research papers in various journals and proceedings. He is currently a reviewer of publishers like the IEEE Access and IGI.

Adaptive Algorithms and Stochastic Approximations

Adaptive Algorithms and Stochastic Approximations
Author: Albert Benveniste
Publisher: Springer Science & Business Media
Total Pages: 373
Release: 2012-12-06
Genre: Mathematics
ISBN: 3642758940

Download Adaptive Algorithms and Stochastic Approximations Book in PDF, Epub and Kindle

Adaptive systems are widely encountered in many applications ranging through adaptive filtering and more generally adaptive signal processing, systems identification and adaptive control, to pattern recognition and machine intelligence: adaptation is now recognised as keystone of "intelligence" within computerised systems. These diverse areas echo the classes of models which conveniently describe each corresponding system. Thus although there can hardly be a "general theory of adaptive systems" encompassing both the modelling task and the design of the adaptation procedure, nevertheless, these diverse issues have a major common component: namely the use of adaptive algorithms, also known as stochastic approximations in the mathematical statistics literature, that is to say the adaptation procedure (once all modelling problems have been resolved). The juxtaposition of these two expressions in the title reflects the ambition of the authors to produce a reference work, both for engineers who use these adaptive algorithms and for probabilists or statisticians who would like to study stochastic approximations in terms of problems arising from real applications. Hence the book is organised in two parts, the first one user-oriented, and the second providing the mathematical foundations to support the practice described in the first part. The book covers the topcis of convergence, convergence rate, permanent adaptation and tracking, change detection, and is illustrated by various realistic applications originating from these areas of applications.

Pipelined Adaptive Digital Filters

Pipelined Adaptive Digital Filters
Author: Naresh R. Shanbhag
Publisher: Springer Science & Business Media
Total Pages: 194
Release: 2012-12-06
Genre: Technology & Engineering
ISBN: 1461526787

Download Pipelined Adaptive Digital Filters Book in PDF, Epub and Kindle

Adaptive filtering is commonly used in many communication applications including speech and video predictive coding, mobile radio, ISDN subscriber loops, and multimedia systems. Existing adaptive filtering topologies are non-concurrent and cannot be pipelined. Pipelined Adaptive Digital Filters presents new pipelined topologies which are useful in reducing area and power and in increasing speed. If the adaptive filter portion of a system suffers from a power-speed-area bottleneck, a solution is provided. Pipelined Adaptive Digital Filters is required reading for all users of adaptive digital filtering algorithms. Algorithm, application and integrated circuit chip designers can learn how their algorithms can be tailored and implemented with lower area and power consumption and with higher speed. The relaxed look-ahead techniques are used to design families of new topologies for many adaptive filtering applications including least mean square and lattice adaptive filters, adaptive differential pulse code modulation coders, adaptive differential vector quantizers, adaptive decision feedback equalizers and adaptive Kalman filters. Those who use adaptive filtering in communications, signal and image processing algorithms can learn the basis of relaxed look-ahead pipelining and can use their own relaxations to design pipelined topologies suitable for their applications. Pipelined Adaptive Digital Filters is especially useful to designers of communications, speech, and video applications who deal with adaptive filtering, those involved with design of modems, wireless systems, subscriber loops, beam formers, and system identification applications. This book can also be used as a text for advanced courses on the topic.

Demand Bibliography

Demand Bibliography
Author:
Publisher:
Total Pages: 158
Release: 1989
Genre: Parallel processing (Electronic computers)
ISBN:

Download Demand Bibliography Book in PDF, Epub and Kindle

Scientific and Technical Aerospace Reports

Scientific and Technical Aerospace Reports
Author:
Publisher:
Total Pages: 488
Release: 1995
Genre: Aeronautics
ISBN:

Download Scientific and Technical Aerospace Reports Book in PDF, Epub and Kindle

Lists citations with abstracts for aerospace related reports obtained from world wide sources and announces documents that have recently been entered into the NASA Scientific and Technical Information Database.

Introduction to Data Compression

Introduction to Data Compression
Author: Khalid Sayood
Publisher: Morgan Kaufmann
Total Pages: 792
Release: 2017-10-23
Genre: Computers
ISBN: 0128097051

Download Introduction to Data Compression Book in PDF, Epub and Kindle

Introduction to Data Compression, Fifth Edition, builds on the success of what is widely considered the best introduction and reference text on the art and science of data compression. Data compression techniques and technology are ever-evolving with new applications in image, speech, text, audio and video. This new edition includes all the latest developments in the field. Khalid Sayood provides an extensive introduction to the theory underlying today’s compression techniques, with detailed instruction for their applications using several examples to explain the concepts. Encompassing the entire field of data compression, the book includes lossless and lossy compression, Huffman coding, arithmetic coding, dictionary techniques, context based compression, and scalar and vector quantization. The book provides a comprehensive working knowledge of data compression, giving the reader the tools to develop a complete and concise compression package. Explains established and emerging standards in- depth, including JPEG 2000, JPEG-LS, MPEG-2, H.264, JBIG 2, ADPCM, LPC, CELP, MELP, iLBC and the new HEVC standard Includes more coverage of lattices in vector quantization Contains improved and expanded end-of-chapter problems Source code is provided via a companion website that gives readers the opportunity to build their own algorithms and choose and implement techniques in their own applications

Author:
Publisher: Javvin Technologies Inc.
Total Pages: 359
Release: 2005-01-01
Genre:
ISBN: 0974094528

Download Book in PDF, Epub and Kindle

This handbook is designed to help information technology and networking professionals to smoothly navigate the network communication protocol territories. (Computer Books - General Information)